biocantor.io.exc

I/O exceptions.

Module Contents

exception biocantor.io.exc.BioCantorIOException

Bases: inscripta.biocantor.exc.BioCantorException

Base exception class for BioCantor.

exception biocantor.io.exc.InvalidInputError

Bases: BioCantorIOException

Base exception class for BioCantor.

exception biocantor.io.exc.StrandViolationWarning

Bases: UserWarning

Base class for warnings generated by user code.

exception biocantor.io.exc.InvalidIntervalWarning

Bases: UserWarning

Base class for warnings generated by user code.

exception biocantor.io.exc.InvalidCDSIntervalWarning

Bases: InvalidIntervalWarning

Base class for warnings generated by user code.

exception biocantor.io.exc.DuplicateFeatureWarning

Bases: UserWarning

Base class for warnings generated by user code.

exception biocantor.io.exc.DuplicateTranscriptWarning

Bases: UserWarning

Base class for warnings generated by user code.

exception biocantor.io.exc.DuplicateSequenceException

Bases: BioCantorIOException

Base exception class for BioCantor.